sequences=7
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>3R8T-A938-A2440
X
>3OHJ-A2278-A945
X
>3OHK-A2278-A945
X
>3OH7-A2278-A945
X
>3OH5-A2278-A945
X
>2J01-A2325-A945
X
>3OI1-A2278-A945
X
</seq>
<hsp>
0 1:0.986946126877
0 2:0.987806269219
0 3:0.998989766611
0 4:0.990641727523
0 5:0.982506947977
0 6:0.999998729029
1 2:0.0429166006658
1 3:0.066987799742
1 4:0.0545625917768
1 5:0.127517291979
1 6:0.114953505289
2 3:0.0648479000237
2 4:0.0654489119644
2 5:0.126889956406
2 6:0.119321103317
3 4:0.0298547217689
3 5:0.115646987953
3 6:0.0859907071787
4 5:0.108318995579
4 6:0.0844960261686
5 6:0.0984379402431
</hsp>