sequences=13
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>3U5B-2660-2655
X
>3I56-01937-01941
X
>1VQ5-01937-01941
X
>1YIJ-01937-01941
X
>2OTL-01937-01941
X
>1YJ9-01937-01941
X
>3CPW-01937-01941
X
>1VQO-01937-01941
X
>3G6E-01937-01941
X
>3CD6-01937-01941
X
>1YHQ-01937-01941
X
>3CCU-01937-01941
X
>1VQP-01937-01941
X
</seq>
<hsp>
0 1:0.999999664844
0 2:0.974202373628
0 3:0.961344090228
0 4:0.943505317352
0 5:0.948134146446
0 6:0.966933284522
0 7:0.999805381304
0 8:0.987756162093
0 9:0.918274672523
0 10:0.973607457259
0 11:0.946264728991
0 12:0.96859752106
1 2:0.0634304366155
1 3:0.0648968072943
1 4:0.0788864267024
1 5:0.0693309838229
1 6:0.122945805162
1 7:0.120892463458
1 8:0.0866479648713
1 9:0.109749700717
1 10:0.103447792285
1 11:0.114314117713
1 12:0.137489262755
2 3:0.0346290552615
2 4:0.0562959250192
2 5:0.056248383642
2 6:0.101208518497
2 7:0.0985039996789
2 8:0.0704514534335
2 9:0.0788626688066
2 10:0.0747400140176
2 11:0.0840684464198
2 12:0.108409745826
3 4:0.0326896765137
3 5:0.0330035546158
3 6:0.094434414102
3 7:0.0969181443838
3 8:0.0617504051166
3 9:0.0580166860988
3 10:0.0675763442283
3 11:0.0721614586135
3 12:0.098719692647
4 5:0.0251341325208
4 6:0.0963222820463
4 7:0.105230715438
4 8:0.0665000405905
4 9:0.0531804762685
4 10:0.0767865647886
4 11:0.0725567295195
4 12:0.105222077744
5 6:0.0861316731823
5 7:0.0976965044927
5 8:0.0636700902414
5 9:0.0482126089441
5 10:0.0676406269737
5 11:0.0672415783416
5 12:0.100405619773
6 7:0.0396258755594
6 8:0.0577632086572
6 9:0.0775772012765
6 10:0.0348091367099
6 11:0.040898462896
6 12:0.0466093622815
7 8:0.052073465538
7 9:0.0993169115174
7 10:0.0377167412579
7 11:0.0647641119579
7 12:0.0535912888699
8 9:0.0802592007708
8 10:0.0399048902331
8 11:0.0527590405651
8 12:0.0645172036468
9 10:0.065339555594
9 11:0.0496003767214
9 12:0.0824440120718
10 11:0.0360688198508
10 12:0.0444670274393
11 12:0.0429885032549
</hsp>