sequences=9
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>1F7Y-B16-B5
X
>3OGE-A1308-A919
X
>3OGY-A1308-A919
X
>3OI0-A1308-A919
X
>3OHY-A1308-A919
X
>1YHQ-0724-02224
X
>3F1E-A1315-Y30
X
>3CCV-0724-02224
X
>3CC4-0724-02224
X
</seq>
<hsp>
0 1:0.748198943556
0 2:0.74616999405
0 3:0.807389167998
0 4:0.809018843659
0 5:0.516336950374
0 6:0.576784463672
0 7:0.537894999162
0 8:0.545524357517
1 2:0.00295019786347
1 3:0.0707352030933
1 4:0.0719416401155
1 5:0.921375817288
1 6:0.975935055312
1 7:0.92213762137
1 8:0.905015172545
2 3:0.0725999357299
2 4:0.0738641252221
2 5:0.920520610591
2 6:0.975190643106
2 7:0.92137716377
2 8:0.904263475831
3 4:0.00316569752616
3 5:0.946907544301
3 6:0.999169782208
3 7:0.946444608543
3 8:0.926981537878
4 5:0.947932968232
4 6:1.0
4 7:0.947362094381
4 8:0.927928711587
5 6:0.104168651039
5 7:0.0504046736196
5 8:0.0727893993259
6 7:0.114414447675
6 8:0.148728127565
7 8:0.053807443524
</hsp>