sequences=8
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>3R8S-A1144-A1004
X
>3CPW-937-942
X
>1Q86-B37-B42
X
>1VQ5-937-942
X
>2QEX-937-942
X
>1VQK-937-942
X
>2XDB-G16-G24
X
>1VQL-937-942
X
</seq>
<hsp>
0 1:0.127667132934
0 2:0.107099076873
0 3:0.121276480359
0 4:0.175259174897
0 5:0.122173807555
0 6:0.999999971821
0 7:0.156941012149
1 2:0.0331396882438
1 3:0.05720773546
1 4:0.0622707455701
1 5:0.0343253016619
1 6:0.905290494311
1 7:0.0583547347158
2 3:0.0638714535081
2 4:0.0840148904754
2 5:0.0420201832689
2 6:0.935844728228
2 7:0.0755654475908
3 4:0.0672535622371
3 5:0.0291451716552
3 6:0.904020774154
3 7:0.0408826281693
4 5:0.0578293712936
4 6:0.866457040016
4 7:0.0330347063281
5 6:0.909252667765
5 7:0.0389892287082
6 7:0.880195639678
</hsp>