sequences=6
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>2UUB-A586-A299
X
>2VQE-A586-A299
X
>2VQF-A586-A299
X
>3OI0-A586-A299
X
>3F1G-A586-A299
X
>3F1E-A586-A299
X
</seq>
<hsp>
0 1:0.258121652821
0 2:0.32752796315
0 3:0.86921812879
0 4:0.824921993434
0 5:0.83381285541
1 2:0.25320036867
1 3:0.98366411913
1 4:0.886447859111
1 5:0.890400740045
2 3:1.0
2 4:0.766897324502
2 5:0.760328138201
3 4:0.776461291624
3 5:0.809268391081
4 5:0.0504047026565
</hsp>