sequences=6
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>3R8T-A2219-A2193
X
>3KNK-A45-A160
X
>2J00-A1134-A1157
X
>3OGY-A1134-A1157
X
>3OGE-A1134-A1157
X
>3OHY-A1134-A1157
X
</seq>
<hsp>
0 1:0.192766915465
0 2:0.962986703057
0 3:0.979122393949
0 4:0.979042984988
0 5:1.0
1 2:0.835380864294
1 3:0.860210979429
1 4:0.860038758063
1 5:0.875995350555
2 3:0.148479714525
2 4:0.147603109331
2 5:0.120987668134
3 4:0.00264885456223
3 5:0.055462886302
4 5:0.0548749892247
</hsp>