sequences=6
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>1GID-B93-B98
X
>1L8V-B93-B98
X
>1L8V-A93-A98
X
>3R8O-A1250-A1353
X
>3R8N-A1250-A1353
X
>3R8T-A166-A2201
X
</seq>
<hsp>
0 1:0.048189479319
0 2:0.0503526155414
0 3:0.923475092134
0 4:0.996109833723
0 5:0.96701767873
1 2:0.00499436102028
1 3:0.930669704755
1 4:0.999999226043
1 5:0.973261488736
2 3:0.928782075828
2 4:0.998255295616
2 5:0.972222544458
3 4:0.13719701867
3 5:0.332211256123
4 5:0.372534242017
</hsp>