sequences=11
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>3U5F-6939-6877
X
>3U5B-2471-235
X
>3U5B-2927-2865
X
>3OHJ-A2334-A2282
X
>3OHK-A2334-A2282
X
>3F1F-A2488-A2436
X
>3F1H-A2488-A2436
X
>3OH5-A2334-A2282
X
>3OH7-A2334-A2282
X
>2J03-A2381-A2329
X
>2J01-A2381-A2329
X
</seq>
<hsp>
0 1:0.583410618456
0 2:0.664252594656
0 3:0.818965990921
0 4:0.811197192935
0 5:0.549708973582
0 6:0.561853043496
0 7:0.597425993001
0 8:0.576296369593
0 9:0.738188884146
0 10:0.785225714363
1 2:0.999990904509
1 3:0.838105004754
1 4:0.855962333811
1 5:0.764888147621
1 6:0.768264655874
1 7:0.709972222889
1 8:0.713845636088
1 9:0.784979342966
1 10:0.831597781313
2 3:0.910841258697
2 4:0.888227035951
2 5:0.447785071647
2 6:0.437780562158
2 7:0.749548067885
2 8:0.722961823473
2 9:0.853286710854
2 10:0.903168080912
3 4:0.0870068521608
3 5:0.684046311645
3 6:0.676933671632
3 7:0.262165679192
3 8:0.312771709479
3 9:0.378417524007
3 10:0.35915808445
4 5:0.670834593335
4 6:0.66255401032
4 7:0.250692241709
4 8:0.286262242206
4 9:0.376440539724
4 10:0.357175990697
5 6:0.0635561500259
5 7:0.551170950486
5 8:0.56525785031
5 9:0.599757883666
5 10:0.629988013592
6 7:0.548969268262
6 8:0.559877082607
6 9:0.569945397937
6 10:0.603666687887
7 8:0.104332012776
7 9:0.389554790061
7 10:0.4097102987
8 9:0.414055169274
8 10:0.440183404217
9 10:0.0916617551213
</hsp>