sequences=9
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>3OHZ-A2334-A2282
X
>3KNI-A2409-A2357
X
>3OI1-A2334-A2282
X
>3R8T-A575-A564
X
>2ZJR-X506-X495
X
>3OH7-A585-A574
X
>3OH5-A585-A574
X
>2J03-A585-A574
X
>2J01-A585-A574
X
</seq>
<hsp>
0 1:0.86911665676
0 2:0.150558146037
0 3:0.782146757547
0 4:0.523026609329
0 5:0.66510895819
0 6:0.615048003133
0 7:0.549718345181
0 8:0.557227534147
1 2:0.803567758553
1 3:0.647839862785
1 4:0.729148398827
1 5:0.502466930165
1 6:0.536201302409
1 7:0.999995696652
1 8:0.973343215419
2 3:0.744710706345
2 4:0.482254306729
2 5:0.597736488606
2 6:0.555749025608
2 7:0.542800311893
2 8:0.546649190222
3 4:0.486669750616
3 5:0.337584913748
3 6:0.321954487592
3 7:0.832361183427
3 8:0.832855067631
4 5:0.330633449118
4 6:0.318067707229
4 7:0.641639209582
4 8:0.641773438572
5 6:0.158813258144
5 7:0.730529826524
5 8:0.719298851542
6 7:0.641314649045
6 8:0.634911944651
7 8:0.0787153187075
</hsp>