sequences=8
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>3U5H-52888-52852
X
>3R8N-A242-A891
X
>3U5D-454-461
X
>3R8S-A2497-A2445
X
>3U5B-2206-2257
X
>3R8T-A2496-A2444
X
>3CXC-02380-02328
X
>3CPW-02380-02328
X
</seq>
<hsp>
0 1:0.540240429087
0 2:0.305447304319
0 3:0.929582952538
0 4:1.0
0 5:0.943242325795
0 6:0.732782013477
0 7:0.786623331698
1 2:0.519064479532
1 3:0.774309913611
1 4:0.733058212708
1 5:0.929088437856
1 6:0.805430061528
1 7:0.825688310519
2 3:0.791595198875
2 4:0.821885967524
2 5:0.758578620379
2 6:0.559020533706
2 7:0.601082919277
3 4:0.525197003589
3 5:0.382216688888
3 6:0.632355982994
3 7:0.614496508425
4 5:0.623374502779
4 6:0.75985763618
4 7:0.734098182385
5 6:0.553886759475
5 7:0.500834730817
6 7:0.137760394832
</hsp>