sequences=8
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>3CCQ-02329-02375
X
>2J01-A815-A681
X
>2UUB-A191-A176
X
>2UXC-A191-A176
X
>3OHD-A1413-A1437
X
>3OHC-A1413-A1437
X
>3R8S-A806-A672
X
>1FFK-954-926
X
</seq>
<hsp>
0 1:0.916454820259
0 2:0.757853746337
0 3:0.709154025131
0 4:0.548377906439
0 5:0.55061570563
0 6:0.740290429971
0 7:1.0
1 2:0.486709961385
1 3:0.564340210973
1 4:0.852006130499
1 5:0.833807324997
1 6:0.65091325263
1 7:0.807079246892
2 3:0.217111194025
2 4:0.671013950565
2 5:0.648405733695
2 6:0.274530292011
2 7:0.486864071972
3 4:0.696631477988
3 5:0.678895329357
3 6:0.247549946012
3 7:0.566458264806
4 5:0.0507845219912
4 6:0.704533924667
4 7:0.655287588109
5 6:0.693969034035
5 7:0.631568048328
6 7:0.563553595037
</hsp>