sequences=8
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>2UXC-A234-A865
X
>1XMQ-A234-A865
X
>2UUA-A234-A865
X
>2VQE-A234-A865
X
>1N32-A234-A865
X
>2VQF-A234-A865
X
>2UUB-A234-A865
X
>1FJG-A234-A865
X
</seq>
<hsp>
0 1:0.641445565276
0 2:0.761964633266
0 3:0.469953854084
0 4:0.358284445619
0 5:0.549964810764
0 6:0.884748648054
0 7:0.849397956255
1 2:0.223303118867
1 3:0.286484646732
1 4:0.511691641593
1 5:0.88009391837
1 6:0.624045450722
1 7:0.479992481599
2 3:0.374308908019
2 4:0.588020751521
2 5:1.0
2 6:0.582319054944
2 7:0.413692208566
3 4:0.414269841628
3 5:0.754772256254
3 6:0.677343731832
3 7:0.470769063317
4 5:0.704851394854
4 6:0.747217879151
4 7:0.715240782981
5 6:0.835460269264
5 7:0.905732681753
6 7:0.539245121132
</hsp>