sequences=7
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>1ET4-B14-B28
X
>1ET4-A14-A28
X
>1ET4-D14-D28
X
>1ET4-C14-C28
X
>1ET4-E14-E28
X
>3U5D-353-325
X
>1DDY-A14-A28
X
</seq>
<hsp>
0 1:0.540165096126
0 2:0.585079478734
0 3:0.631401605885
0 4:0.475960822359
0 5:1.0
0 6:0.408516115499
1 2:0.334027420312
1 3:0.408895978139
1 4:0.358181481926
1 5:0.749479028703
1 6:0.659398240605
2 3:0.34969007884
2 4:0.387417218327
2 5:0.941890573445
2 6:0.623807310562
3 4:0.506099159312
3 5:0.802550358932
3 6:0.61376648032
4 5:0.74188320914
4 6:0.438203445891
5 6:0.867124435708
</hsp>