sequences=17
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>3I56-968-9111
X
>2O3X-A17-B3
X
>1VQ9-968-9111
X
>1YIT-968-9111
X
>1YJ9-968-9111
X
>1QVG-968-9111
X
>1Q81-A1923-A1930
X
>2ZJR-X28-X442
X
>1YJW-016-0505
X
>1N32-A1283-A1306
X
>1S72-016-0505
X
>1M90-A16-A505
X
>1JJ2-016-0505
X
>1XMQ-A1278-A1301
X
>1KD1-A16-A505
X
>2VQE-A1283-A1306
X
>2VQF-A1283-A1306
X
</seq>
<hsp>
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0 2:0.203494568947
0 3:0.259093468014
0 4:0.304710169077
0 5:0.33591039587
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15 16:0.431349865199
</hsp>