sequences=15
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>1KD1-A1771-A1775
X
>3CXC-01771-01775
X
>1YJN-01771-01775
X
>1VQL-01771-01775
X
>3CCQ-01771-01775
X
>1N8R-A1771-A1775
X
>1VQO-01771-01775
X
>1VQK-01771-01775
X
>3CMA-01771-01775
X
>1YHQ-01771-01775
X
>3CCE-01771-01775
X
>3CCM-01771-01775
X
>3CC7-01771-01775
X
>1YI2-01771-01775
X
>1VQN-01771-01775
X
</seq>
<hsp>
0 1:0.711113653598
0 2:0.458642978767
0 3:0.841439037738
0 4:0.692739439849
0 5:0.368315441458
0 6:0.75562229532
0 7:0.777440121575
0 8:0.737834824324
0 9:0.704302480893
0 10:0.675493983868
0 11:0.790645122538
0 12:0.678900164787
0 13:0.607751270999
0 14:0.70467331139
1 2:0.551961037873
1 3:0.853919648557
1 4:1.0
1 5:0.60039815776
1 6:0.89253190142
1 7:0.892475401409
1 8:0.907223431357
1 9:0.915389128096
1 10:0.921060105372
1 11:0.943117158276
1 12:0.835678012702
1 13:0.818763760232
1 14:0.925675508704
2 3:0.705908461366
2 4:0.670229522143
2 5:0.540023007937
2 6:0.703315481139
2 7:0.690726108965
2 8:0.534124684123
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2 11:0.554001230515
2 12:0.459381866511
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3 4:0.547858055893
3 5:0.623047624619
3 6:0.260101562609
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3 10:0.643106095349
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3 14:0.342598480045
4 5:0.596085417191
4 6:0.562124561147
4 7:0.496414187762
4 8:0.409853119822
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4 10:0.379805349244
4 11:0.448638112289
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4 14:0.356440880352
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6 7:0.144664264088
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6 13:0.40098016637
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7 8:0.500401928028
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7 10:0.612287605993
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8 9:0.413403397231
8 10:0.417460499952
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8 12:0.168205597136
8 13:0.228161068177
8 14:0.267982951205
9 10:0.444203663432
9 11:0.435950546273
9 12:0.447031753604
9 13:0.247605508846
9 14:0.262820760259
10 11:0.376924770244
10 12:0.34470698592
10 13:0.36080222991
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11 12:0.214709998553
11 13:0.265397750711
11 14:0.307969541314
12 13:0.223459565898
12 14:0.332666109792
13 14:0.189578694248
</hsp>