sequences=11
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>1VQ5-01923-01930
X
>1VQ7-01923-01930
X
>1FFK-01876-01883
X
>1Q82-A1923-A1930
X
>1VQ9-02387-02451
X
>3OHZ-A2290-A2322
X
>1N32-A1067-A1072
X
>2UUB-A1067-A1072
X
>2VQE-A1067-A1072
X
>1FJG-A1067-A1072
X
>1Y39-C39-C50
X
</seq>
<hsp>
0 1:0.240789858264
0 2:0.129872343552
0 3:0.246311009553
0 4:0.856039601443
0 5:0.524417036801
0 6:0.89949650081
0 7:0.846078216438
0 8:0.823285486177
0 9:0.640356164906
0 10:0.688709285089
1 2:0.163163644044
1 3:0.214979030234
1 4:0.798655211163
1 5:0.417022097851
1 6:0.976785018308
1 7:0.844061660964
1 8:0.880306473518
1 9:0.603915599321
1 10:0.654734372636
2 3:0.203552638377
2 4:0.780358173155
2 5:0.424490071362
2 6:0.877229281674
2 7:0.787834057986
2 8:0.798511481005
2 9:0.565788600285
2 10:0.616191613329
3 4:0.781865564637
3 5:0.40823899512
3 6:1.0
3 7:0.868431707933
3 8:0.904043998264
3 9:0.640152259788
3 10:0.697497501302
4 5:0.461432486494
4 6:0.755972600268
4 7:0.414868702966
4 8:0.587820053694
4 9:0.431118354011
4 10:0.382201402407
5 6:0.834809959879
5 7:0.598506570097
5 8:0.716187068652
5 9:0.351069413035
5 10:0.423131608506
6 7:0.375741794815
6 8:0.238644525366
6 9:0.57628104377
6 10:0.495286666294
7 8:0.258316866988
7 9:0.378908070974
7 10:0.233596201143
8 9:0.452577617143
8 10:0.364665873708
9 10:0.199394179811
</hsp>