sequences=10
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>3CCU-969-9110
X
>3CCL-969-9110
X
>2J00-A1067-A1072
X
>3R8N-A131-A227
X
>3U5B-21213-21236
X
>3CC4-969-9110
X
>3G71-969-9110
X
>3CC2-969-9110
X
>2OTL-969-9110
X
>1MZP-B4-B50
X
</seq>
<hsp>
0 1:0.0921337875377
0 2:0.738491515245
0 3:0.230468686044
0 4:0.270866726227
0 5:0.272320309245
0 6:0.317253080196
0 7:0.390740776516
0 8:0.354362631374
0 9:0.547295495732
1 2:0.714328614132
1 3:0.212213117596
1 4:0.257585795949
1 5:0.19780395404
1 6:0.250568677785
1 7:0.355419980981
1 8:0.302002833721
1 9:0.512227392294
2 3:0.699956176883
2 4:0.852982501173
2 5:0.653920237293
2 6:0.791433526272
2 7:0.738690883106
2 8:0.632070119799
2 9:0.999999031255
3 4:0.220594342085
3 5:0.219432574725
3 6:0.285403167727
3 7:0.359084743066
3 8:0.305829471983
3 9:0.498522878523
4 5:0.26132030075
4 6:0.277062513143
4 7:0.389527056438
4 8:0.362872038102
4 9:0.329492991885
5 6:0.205260164252
5 7:0.322477672539
5 8:0.215301236727
5 9:0.431853747473
6 7:0.233589013626
6 8:0.211388120778
6 9:0.45603818312
7 8:0.144299895144
7 9:0.551411531881
8 9:0.52180245842
</hsp>