sequences=9
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>3U5F-61052-61054
X
>3R8S-A870-A899
X
>3OHK-A2290-A2322
X
>3U5D-12988-13003
X
>3OHJ-A2290-A2322
X
>3U5H-51670-51674
X
>2HVY-E22-E34
X
>3R8S-A1849-A1879
X
>3NVI-E3-E19
X
</seq>
<hsp>
0 1:0.733621983685
0 2:0.529557532335
0 3:0.406777861873
0 4:0.533429440275
0 5:0.999998714846
0 6:0.660105137592
0 7:0.736199154132
0 8:0.684220728178
1 2:0.75132140645
1 3:0.440062138026
1 4:0.747823165417
1 5:0.761486084348
1 6:0.433210854473
1 7:0.618472243623
1 8:0.532887174776
2 3:0.414999141257
2 4:0.0506264349464
2 5:0.972472025766
2 6:0.543494562415
2 7:0.634507700442
2 8:0.627983386656
3 4:0.421039554784
3 5:0.798015989497
3 6:0.417142433205
3 7:0.513314929353
3 8:0.444340614544
4 5:0.941449470599
4 6:0.517576144789
4 7:0.603381462912
4 8:0.601130625307
5 6:0.605805813647
5 7:0.434954765033
5 8:0.405495990336
6 7:0.32583700543
6 8:0.279144465501
7 8:0.15046636649
</hsp>