sequences=7
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>3KNK-A1217-A1931
X
>1VQ8-969-9110
X
>1T0E-A10-C6
X
>2VQE-A1039-A1170
X
>3RG5-A7-A78
X
>3U5H-52922-53034
X
>3HL2-E7-E71
X
</seq>
<hsp>
0 1:0.449250720523
0 2:0.429762848328
0 3:0.299669355239
0 4:0.830292424233
0 5:0.62521122993
0 6:0.901024245467
1 2:0.187219714642
1 3:0.350968472358
1 4:0.747392753615
1 5:0.625614596716
1 6:0.996298590454
2 3:0.3512633026
2 4:0.757635548853
2 5:0.633187348617
2 6:1.0
3 4:0.771436738216
3 5:0.430665711769
3 6:0.807622142339
4 5:0.58886821127
4 6:0.608819518626
5 6:0.458151340381
</hsp>