sequences=6
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>2O3V-A18-B3
X
>3R8S-A279-A359
X
>3OI1-A1212-A1932
X
>2QA4-969-9110
X
>3CCQ-969-9110
X
>3OH5-A1212-A1932
X
</seq>
<hsp>
0 1:1.0
0 2:0.667311862823
0 3:0.927617484877
0 4:0.747040312582
0 5:0.518507197211
1 2:0.574491778315
1 3:0.4637397981
1 4:0.551962822017
1 5:0.66026928464
2 3:0.474295490484
2 4:0.29477783907
2 5:0.334206943939
3 4:0.306589850508
3 5:0.6667422729
4 5:0.527394157085
</hsp>