sequences=13
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>3KNK-A1225-A1554
X
>3KFU-M14-M45
X
>3KFU-N14-N45
X
>3OHK-A1220-A1555
X
>3OHJ-A1220-A1555
X
>3OH7-A1220-A1555
X
>3OI1-A1220-A1555
X
>3OH5-A1220-A1555
X
>3F1E-Y14-Y48
X
>3OHZ-A1220-A1555
X
>3F1G-Y14-Y48
X
>2ZZN-C14-C46
X
>2J00-V14-V48
X
</seq>
<hsp>
0 1:1.0
0 2:0.998463708897
0 3:0.741665572435
0 4:0.709631130897
0 5:0.75178911113
0 6:0.723291941423
0 7:0.740617597389
0 8:0.872988698518
0 9:0.702544156486
0 10:0.877621550065
0 11:0.908058667678
0 12:0.93642398733
1 2:0.00582414979995
1 3:0.696896785729
1 4:0.69796164909
1 5:0.646680075821
1 6:0.656801659227
1 7:0.638646923565
1 8:0.743655023867
1 9:0.65119439568
1 10:0.75107749579
1 11:0.764812861566
1 12:0.678671541231
2 3:0.697300754666
2 4:0.698181459271
2 5:0.646884324614
2 6:0.657087077101
2 7:0.638821272841
2 8:0.742805921357
2 9:0.6513139852
2 10:0.750202361829
2 11:0.76270005082
2 12:0.674603521521
3 4:0.0615867916446
3 5:0.100695686315
3 6:0.0855191082432
3 7:0.0811591781023
3 8:0.712927230102
3 9:0.0938500043427
3 10:0.723878149349
3 11:0.778394576514
3 12:0.963453481693
4 5:0.0994019531367
4 6:0.116561220775
4 7:0.0807438179049
4 8:0.728403354541
4 9:0.106610094328
4 10:0.739214661136
4 11:0.788952187511
4 12:0.956838591662
5 6:0.136803045037
5 7:0.0668671503612
5 8:0.735326815893
5 9:0.136332928692
5 10:0.74635833721
5 11:0.796099356755
5 12:0.93688169492
6 7:0.0985558398854
6 8:0.659393999516
6 9:0.0501532586404
6 10:0.670035748548
6 11:0.721023684467
6 12:0.91729191112
7 8:0.688679152468
7 9:0.0916397406755
7 10:0.699493846149
7 11:0.751910939615
7 12:0.915500515057
8 9:0.655574917793
8 10:0.0148438868416
8 11:0.406007292815
8 12:0.663879413362
9 10:0.666079956118
9 11:0.709166242291
9 12:0.898840036369
10 11:0.404175491641
10 12:0.664074873955
11 12:0.513133841224
</hsp>