sequences=15
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>3OGE-A1326-A1349
X
>3CCJ-01396-01388
X
>3GX7-A37-A16
X
>2UUB-A28-A529
X
>3RKF-D44-D52
X
>3SKZ-A60-A7
X
>3CPW-02600-02560
X
>1K9M-A2600-A2560
X
>2YDH-A86-A6
X
>3OGY-A1079-A1050
X
>2CKY-A3-A75
X
>1VQN-01230-01244
X
>3CC2-01230-01244
X
>3U5D-345-330
X
>1YIT-01509-01593
X
</seq>
<hsp>
0 1:0.810466935103
0 2:0.734209515202
0 3:0.732851693912
0 4:0.623623982275
0 5:0.822485552483
0 6:0.582437241739
0 7:0.730865285971
0 8:0.866445919995
0 9:0.590710347056
0 10:0.863309086714
0 11:0.711054774672
0 12:0.675280947019
0 13:0.800917982589
0 14:0.749207359618
1 2:0.926938251099
1 3:0.330720043274
1 4:0.420442672062
1 5:0.362330066162
1 6:0.475432173658
1 7:0.441721409315
1 8:0.483743190089
1 9:0.595946669151
1 10:0.49149363061
1 11:0.364591299642
1 12:0.328070628312
1 13:0.430451429349
1 14:0.463172165621
2 3:0.813055005802
2 4:0.890657033028
2 5:0.941289430717
2 6:0.657714560039
2 7:0.733054175932
2 8:1.0
2 9:0.80390662676
2 10:0.910974435611
2 11:0.798196439053
2 12:0.791543955297
2 13:0.804957959645
2 14:0.66969366866
3 4:0.541356899627
3 5:0.373915408533
3 6:0.430041014595
3 7:0.454494100272
3 8:0.618310861506
3 9:0.6610035344
3 10:0.325938128816
3 11:0.29098436792
3 12:0.293494417975
3 13:0.490716684365
3 14:0.378103635236
4 5:0.427763661461
4 6:0.368548160005
4 7:0.431573066642
4 8:0.537843365584
4 9:0.413527253588
4 10:0.654582047255
4 11:0.411804343614
4 12:0.316879276294
4 13:0.548986158198
4 14:0.5944945839
5 6:0.490624449707
5 7:0.565712295927
5 8:0.700131437494
5 9:0.718620993591
5 10:0.368932575968
5 11:0.290540317028
5 12:0.2817405723
5 13:0.610110653256
5 14:0.548180638778
6 7:0.231898667148
6 8:0.674602157496
6 9:0.52710101865
6 10:0.648157146141
6 11:0.44534365081
6 12:0.351988302515
6 13:0.600316847357
6 14:0.525446212479
7 8:0.55759214167
7 9:0.500327964946
7 10:0.68411456382
7 11:0.478022576258
7 12:0.387266421133
7 13:0.52697740002
7 14:0.486605872421
8 9:0.375308240936
8 10:0.692940705912
8 11:0.517380555844
8 12:0.495486891644
8 13:0.321500013304
8 14:0.48003458048
9 10:0.765204776706
9 11:0.528793430535
9 12:0.477905952551
9 13:0.446125313669
9 14:0.516023359633
10 11:0.266616823636
10 12:0.366553741354
10 13:0.545022017009
10 14:0.413172864473
11 12:0.117569574751
11 13:0.396745507864
11 14:0.309197842291
12 13:0.406669259939
12 14:0.351581006524
13 14:0.314339942323
</hsp>