sequences=9
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>2UUA-A517-A490
X
>3KNK-A2616-A2601
X
>3KNH-A1171-A1024
X
>3F2T-X76-X60
X
>1QVG-01509-01593
X
>1K8A-A1509-A1593
X
>3U5F-6801-6738
X
>3OGE-A1180-A1033
X
>3F1H-A2-A2876
X
</seq>
<hsp>
0 1:0.531977104613
0 2:0.92536028785
0 3:0.774135705878
0 4:0.724387351788
0 5:0.639690627174
0 6:0.624590838366
0 7:0.395694114942
0 8:0.736410575363
1 2:0.785347650329
1 3:0.646473667659
1 4:0.641883822767
1 5:0.610020934368
1 6:0.390467001184
1 7:0.464001671048
1 8:0.988067105416
2 3:0.974064068225
2 4:1.0
2 5:0.906293425601
2 6:0.726518200465
2 7:0.727845850957
2 8:0.928793063438
3 4:0.160453256642
3 5:0.216745648363
3 6:0.393224177027
3 7:0.49666795751
3 8:0.809185193126
4 5:0.191074923981
4 6:0.431429148878
4 7:0.477635907117
4 8:0.772232282625
5 6:0.386663879731
5 7:0.360775619152
5 8:0.68780080621
6 7:0.318445324306
6 8:0.76041601498
7 8:0.551623580605
</hsp>