sequences=14
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>3R8O-A336-A349
X
>3U5B-2172-2141
X
>1VQ5-0351-0277
X
>1VQP-0351-0277
X
>3CXC-0351-0277
X
>3NPN-A33-A4
X
>2QA4-0351-0277
X
>1KD1-A351-A277
X
>1K8A-A351-A277
X
>1K9M-A351-A277
X
>3CPW-0351-0277
X
>1M90-A351-A277
X
>1Q82-A351-A277
X
>1Q81-A351-A277
X
</seq>
<hsp>
0 1:0.999996097299
0 2:0.787476153627
0 3:0.775542141609
0 4:0.875633519874
0 5:0.957874385381
0 6:0.702948777109
0 7:0.801264007792
0 8:0.800649526031
0 9:0.813787304635
0 10:0.672749442848
0 11:0.775036932766
0 12:0.789824537222
0 13:0.792710067942
1 2:0.503008718166
1 3:0.516950448413
1 4:0.465880582584
1 5:0.664172447687
1 6:0.495340496423
1 7:0.425060492845
1 8:0.447199445459
1 9:0.431091316915
1 10:0.49019892022
1 11:0.423553340297
1 12:0.444067798696
1 13:0.429535625956
2 3:0.356392020563
2 4:0.339974840357
2 5:0.559952960097
2 6:0.369519753891
2 7:0.194420011698
2 8:0.175013404494
2 9:0.163683182202
2 10:0.215459349571
2 11:0.174542941204
2 12:0.197484197937
2 13:0.21754811379
3 4:0.260465282875
3 5:0.369423698907
3 6:0.333843316787
3 7:0.264728122735
3 8:0.266366017611
3 9:0.253999957281
3 10:0.241379432015
3 11:0.217526233572
3 12:0.218488074218
3 13:0.241850015636
4 5:0.552364949596
4 6:0.269290723361
4 7:0.196454643302
4 8:0.210667378815
4 9:0.213611043854
4 10:0.237414275696
4 11:0.215837179047
4 12:0.171002958174
4 13:0.170266796659
5 6:0.59438789105
5 7:0.52919667914
5 8:0.536419247823
5 9:0.515962564362
5 10:0.545162226652
5 11:0.46880035269
5 12:0.511255844028
5 13:0.53809747925
6 7:0.228766263003
6 8:0.258961184909
6 9:0.281252828788
6 10:0.226612538597
6 11:0.275605133806
6 12:0.250421912714
6 13:0.229964315024
7 8:0.0430514806818
7 9:0.0649647459482
7 10:0.16475117895
7 11:0.126166789131
7 12:0.0759799968723
7 13:0.0655220162221
8 9:0.0493800853919
8 10:0.1655898563
8 11:0.133012213951
8 12:0.0731372064113
8 13:0.0753955853764
9 10:0.169235846833
9 11:0.108529082039
9 12:0.0772865749585
9 13:0.0773431400337
10 11:0.130689281268
10 12:0.132173802685
10 13:0.1439931192
11 12:0.0987630215041
11 13:0.12086892128
12 13:0.0681969193644
</hsp>