sequences=16
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>3ADD-D37-D33
X
>3CCL-02329-02375
X
>1QTQ-B23-B41
X
>3U5B-2469-237
X
>3OHD-A1472-A1379
X
>3CC7-02329-02375
X
>2J03-A953-A964
X
>3NDB-M97-M78
X
>405D-B10-A5
X
>1Z7F-C10-B5
X
>3U5F-6701-6725
X
>402D-B4-A3
X
>3U5F-6728-6698
X
>2V3C-N78-N59
X
>402D-A4-B3
X
>2ZZN-C36-C30
X
</seq>
<hsp>
0 1:0.683380719485
0 2:0.764755529212
0 3:0.624440106369
0 4:0.477480874005
0 5:0.82773035302
0 6:0.574580258753
0 7:0.537025889162
0 8:0.457222533534
0 9:0.414951226686
0 10:0.501226424649
0 11:0.597357681598
0 12:1.0
0 13:0.475379956152
0 14:0.501804432238
0 15:0.60084020472
1 2:0.26003399013
1 3:0.639934760313
1 4:0.425839371317
1 5:0.22626853441
1 6:0.20844355875
1 7:0.324379808743
1 8:0.325845085964
1 9:0.437710290714
1 10:0.577212131708
1 11:0.651557837492
1 12:0.579781624452
1 13:0.531979524747
1 14:0.540891732362
1 15:0.391998448413
2 3:0.546344509067
2 4:0.39956741569
2 5:0.20336962212
2 6:0.321120974396
2 7:0.286357503716
2 8:0.383049859463
2 9:0.408980286301
2 10:0.530586591697
2 11:0.547425522346
2 12:0.367530900248
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3 4:0.453927172338
3 5:0.641641930515
3 6:0.638580229036
3 7:0.476764576216
3 8:0.555650496022
3 9:0.385376709332
3 10:0.237294156316
3 11:0.264624086922
3 12:0.624486027103
3 13:0.439661381592
3 14:0.314048601503
3 15:0.475260416804
4 5:0.543057723182
4 6:0.292199145272
4 7:0.263003658662
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4 9:0.17994119411
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4 15:0.401222558008
5 6:0.38180042967
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5 8:0.471590145136
5 9:0.51978816308
5 10:0.63030532795
5 11:0.685440437799
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5 13:0.584946694009
5 14:0.58535540161
5 15:0.379395509108
6 7:0.263950539987
6 8:0.15511522403
6 9:0.336020288282
6 10:0.529366453208
6 11:0.579510814104
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6 15:0.373675715832
7 8:0.229197269013
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7 10:0.375697337222
7 11:0.443919702136
7 12:0.517347678445
7 13:0.307269218369
7 14:0.36213901535
7 15:0.239048357716
8 9:0.21759150836
8 10:0.429683225875
8 11:0.475021488985
8 12:0.657105526644
8 13:0.281814249572
8 14:0.356775736766
8 15:0.330348110494
9 10:0.250219856435
9 11:0.308599851265
9 12:0.609943678039
9 13:0.183004767443
9 14:0.211019432361
9 15:0.282238532354
10 11:0.194820842593
10 12:0.657864750875
10 13:0.338745729899
10 14:0.203877762398
10 15:0.400085555694
11 12:0.636829808556
11 13:0.331261440367
11 14:0.227804971765
11 15:0.468652781689
12 13:0.60714542857
12 14:0.605115744364
12 15:0.4477867692
13 14:0.201143696209
13 15:0.287285320357
14 15:0.307699008252
</hsp>