sequences=7
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>3BNR-A7-B16
X
>3BNR-C7-D15
X
>3BNS-C7-D15
X
>3EGZ-B5-B59
X
>3BNQ-C7-D15
X
>3BNS-A7-B16
X
>3BNQ-A7-B17
X
</seq>
<hsp>
0 1:0.291880744421
0 2:0.536530462086
0 3:1.0
0 4:0.727166260359
0 5:0.383601170458
0 6:0.563691950831
1 2:0.382438852672
1 3:0.811968306435
1 4:0.586245695296
1 5:0.358621947379
1 6:0.453164018292
2 3:0.580259188625
2 4:0.288345505526
2 5:0.260220851443
2 6:0.393106371683
3 4:0.63232191041
3 5:0.765311351152
3 6:0.762072588767
4 5:0.422622614272
4 6:0.373729387177
5 6:0.330614759423
</hsp>