sequences=12
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>3KNK-A2170-A2171
X
>2J03-A2142-A2143
X
>2QA4-01326-01327
X
>1VQN-02529-02530
X
>3R8T-A2257-A2258
X
>3OI1-A2095-A2096
X
>3OH5-A2483-A2484
X
>3OH7-A2483-A2484
X
>3OI1-A2483-A2484
X
>3OHZ-A2483-A2484
X
>3OHK-A2483-A2484
X
>3OHJ-A2483-A2484
X
</seq>
<hsp>
0 1:0.665868796305
0 2:0.731755975761
0 3:0.603575661284
0 4:0.778164666715
0 5:0.546207766195
0 6:1.0
0 7:0.989715586135
0 8:0.914776981688
0 9:0.90565310999
0 10:0.89820697721
0 11:0.895463380455
1 2:0.113876980507
1 3:0.278202735243
1 4:0.238978294439
1 5:0.299606391558
1 6:0.591203393641
1 7:0.577665218291
1 8:0.502937215581
1 9:0.509202581679
1 10:0.567564838394
1 11:0.583054352784
2 3:0.284354843505
2 4:0.213822584682
2 5:0.339695753243
2 6:0.54870225164
2 7:0.533194279004
2 8:0.469463728791
2 9:0.480720059058
2 10:0.522574482083
2 11:0.542195946527
3 4:0.259597261582
3 5:0.212580137571
3 6:0.67336671243
3 7:0.666259242444
3 8:0.582601189262
3 9:0.577752857084
3 10:0.565108993392
3 11:0.570140351577
4 5:0.269043512206
4 6:0.502194471986
4 7:0.498990099332
4 8:0.403984820869
4 9:0.404518156973
4 10:0.443523394821
4 11:0.454943818497
5 6:0.620936118144
5 7:0.619941609813
5 8:0.512879521722
5 9:0.501802564174
5 10:0.514690022375
5 11:0.514850842774
6 7:0.0515727624777
6 8:0.146413614731
6 9:0.151778294744
6 10:0.216449850773
6 11:0.232432963469
7 8:0.144935422555
7 9:0.165605194648
7 10:0.224479392834
7 11:0.246937143072
8 9:0.0568999878152
8 10:0.196034523192
8 11:0.217963896287
9 10:0.186144561314
9 11:0.198492850956
10 11:0.042839822721
</hsp>