sequences=11
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>2J03-B107-B65
X
>3OH5-B107-B65
X
>3OH7-B107-B65
X
>3OHJ-B107-B65
X
>2ZZM-B7-B12
X
>3OHK-B107-B65
X
>3OHZ-B107-B65
X
>3OI1-B107-B65
X
>1EUY-B6-B11
X
>1U0B-A7-A12
X
>1QRS-B6-B11
X
</seq>
<hsp>
0 1:1.0
0 2:0.977209869146
0 3:0.967169029152
0 4:0.530750367987
0 5:0.966832557248
0 6:0.748315423786
0 7:0.748080912502
0 8:0.394474286911
0 9:0.697106606659
0 10:0.683120017502
1 2:0.0512939664477
1 3:0.0846890863925
1 4:0.61881733919
1 5:0.0914131505526
1 6:0.276173436306
1 7:0.284871309476
1 8:0.710984789806
1 9:0.582483835892
1 10:0.718655759867
2 3:0.0754677115465
2 4:0.595792674752
2 5:0.0736016022361
2 6:0.252632954036
2 7:0.259518379682
2 8:0.682307274403
2 9:0.546417271945
2 10:0.68096236719
3 4:0.608474726554
3 5:0.0328376751426
3 6:0.261729109347
3 7:0.269262056231
3 8:0.679155585671
3 9:0.549309352523
3 10:0.681716996909
4 5:0.606270682794
4 6:0.352252779509
4 7:0.342806191193
4 8:0.330428080404
4 9:0.367680204608
4 10:0.456629143634
5 6:0.260570159763
5 7:0.267194522897
5 8:0.672053310071
5 9:0.535124235501
5 10:0.66706093198
6 7:0.0368846072356
6 8:0.463512580358
6 9:0.381552558476
6 10:0.520005776758
7 8:0.467599876721
7 9:0.375713670379
7 10:0.515634261429
8 9:0.354539744935
8 10:0.370214304688
9 10:0.154908320092
</hsp>