sequences=11
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>1Q81-B111-B64
X
>1N8R-B111-B64
X
>3CCQ-9111-964
X
>1Q82-B111-B64
X
>1YIJ-9111-964
X
>1KD1-B111-B64
X
>3CD6-9111-964
X
>1Q86-B111-B64
X
>1YJN-9111-964
X
>3I56-9111-964
X
>1YIT-9111-964
X
</seq>
<hsp>
0 1:0.472374717919
0 2:0.76542561878
0 3:0.471777311167
0 4:0.587698251366
0 5:0.534785088085
0 6:0.802877505701
0 7:0.291582862601
0 8:0.70950079477
0 9:0.446155366348
0 10:0.435230430188
1 2:0.947832423629
1 3:0.217646005722
1 4:0.599974812293
1 5:0.341223826271
1 6:0.883517537582
1 7:0.376966029873
1 8:0.92625906586
1 9:0.42345132779
1 10:0.592177921702
2 3:0.848931120645
2 4:0.519045642955
2 5:0.937269850841
2 6:0.310985467212
2 7:0.664710356932
2 8:0.389593796274
2 9:0.704988074222
2 10:0.802754640698
3 4:0.588637006925
3 5:0.257794542343
3 6:0.809832838438
3 7:0.371978789166
3 8:0.907910491751
3 9:0.455895883478
3 10:0.671323601374
4 5:0.747450889934
4 6:0.426867789267
4 7:0.45748884572
4 8:0.452726734107
4 9:0.49139319322
4 10:0.572603064668
5 6:0.919244705998
5 7:0.466687556715
5 8:0.999997302448
5 9:0.533015251097
5 10:0.72273033116
6 7:0.67332606723
6 8:0.446537214645
6 9:0.654839317412
6 10:0.824654374642
7 8:0.633941769176
7 9:0.227266288323
7 10:0.408719257161
8 9:0.637144509221
8 10:0.587633131835
9 10:0.394674195911
</hsp>