sequences=10
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>3OHJ-A1827-A1834
X
>3R8S-A1904-A1911
X
>3OHZ-A1827-A1834
X
>3OI1-A1827-A1834
X
>3R8T-A1903-A1910
X
>3KNK-A1826-A1833
X
>1I6U-D24-D9
X
>1KXK-A53-A16
X
>3OH7-A1827-A1834
X
>2J03-A1827-A1834
X
</seq>
<hsp>
0 1:0.274579660286
0 2:0.301876897651
0 3:0.301422882333
0 4:0.453963895955
0 5:0.417298323147
0 6:0.672640728508
0 7:0.429592296419
0 8:0.152344060684
0 9:0.429944922568
1 2:0.297233677096
1 3:0.299671187629
1 4:0.435316670952
1 5:0.416877466209
1 6:0.865323209593
1 7:0.273089404951
1 8:0.259293955904
1 9:0.513830249354
2 3:0.0141752956547
2 4:0.64441026713
2 5:0.609225629923
2 6:0.667984574897
2 7:0.485053651567
2 8:0.264470846239
2 9:0.575528355963
3 4:0.646262936948
3 5:0.610510031005
3 6:0.663342495852
3 7:0.48405828252
3 8:0.263100029958
3 9:0.57123303838
4 5:0.0906722044022
4 6:0.99999176916
4 7:0.450303363523
4 8:0.450416021927
4 9:0.52878823292
5 6:0.971105127791
5 7:0.440006481362
5 8:0.410505757998
5 9:0.51177130365
6 7:0.998128387904
6 8:0.670103018537
6 9:0.719225859086
7 8:0.426110992286
7 9:0.568850931414
8 9:0.36817319402
</hsp>