ClaRNA

Doublet Group info: classifier/stacking/></UC/sub-001

distance statistics     members distance graph (clans)     superimpose     cluster

Details

N. type: None
Program used: None
Category: classifier
SubCategory: stacking
Desc: ></UC/sub-001
Members:
count: 168
download members
2GDI:Y18:Y17
1YIT:01829:01828
3U5H:52097:52096
2GDI:X18:X17
1YJN:01930:01929
3CCJ:01930:01929
1VQL:01829:01828
2OTL:01829:01828
3CCQ:01829:01828
1KD1:A1829:A1828
1VQ4:01829:01828
1YJW:01829:01828
1S72:01829:01828
1VQK:01829:01828
3CC2:01829:01828
1VQP:01829:01828
3CXC:01829:01828
1VQO:01829:01828
1K8A:A1829:A1828
1QVG:01829:01828
1JJ2:01829:01828
3CPW:01829:01828
1YIJ:01829:01828
1VQ4:01930:01929
1NJI:A2231:A2232
1K9M:A2079:A2078
1N8R:A2079:A2078
3CCM:02231:02232
2OTJ:01930:01929
1VQM:01930:01929
1YJN:02079:02078
3CCV:02079:02078
1Q82:A2079:A2078
3CC7:01829:01828
1YJW:01930:01929
3CCL:01829:01828
2OTJ:01829:01828
3CCU:01829:01828
1GID:B64:B63
1QVG:02231:02232
3U5H:5882:5881
3CD6:02079:02078
3CME:02231:02232
3CCR:01829:01828
1Q81:A2079:A2078
1VQ8:02231:02232
3I56:01930:01929
3CMA:02231:02232
1Q86:A1829:A1828
1QVG:02079:02078
1N8R:A1930:A1929
1YIT:02079:02078
1VQ7:01930:01929
1YJW:02231:02232
3U5B:21188:21189
1GID:A64:A63
1VQ6:01930:01929
1Q81:A1829:A1828
2OTL:01930:01929
3CD6:01829:01828
3CMA:02079:02078
2QEX:02231:02232
3CCJ:02231:02232
3CCQ:01930:01929
1VQ9:01930:01929
1VQK:01930:01929
1VQ5:01930:01929
3CCV:02231:02232
3CPW:02231:02232
1VQK:02231:02232
1YHQ:02231:02232
2OTL:02231:02232
1YIJ:02231:02232
1YIJ:01930:01929
3CCU:02079:02078
1VQ9:02079:02078
1QVG:01930:01929
1L8V:B64:B63
1VQN:02231:02232
1YJN:02231:02232
1K8A:A2231:A2232
3CXC:02231:02232
3CC2:02231:02232
1VQ8:01930:01929
1K9M:A2231:A2232
1VQL:02231:02232
3CC7:02231:02232
1Q86:A2231:A2232
3CC4:02231:02232
3CXC:01930:01929
1L8V:A64:A63
1VQ9:02231:02232
3CD6:01930:01929
1VQO:02231:02232
3I56:02231:02232
3G71:01930:01929
1S72:02231:02232
3CC4:01930:01929
1M90:A2231:A2232
1Q82:A2231:A2232
1FG0:A70:A69
1FFK:01883:01882
1YIT:01930:01929
3CCR:01930:01929
1YI2:01930:01929
1M90:A1930:A1929
1JJ2:02231:02232
1Q86:A1930:A1929
3CCE:01930:01929
3CME:02079:02078
1VQP:02231:02232
1VQ7:02231:02232
3F1F:A1989:A1990
1KD1:A2231:A2232
3G6E:02231:02232
1YIT:02231:02232
1VQ6:02231:02232
1VQ4:02231:02232
1YJ9:01930:01929
3CCU:02231:02232
3F1H:A1989:A1990
3CCL:02231:02232
3CCE:02231:02232
3CD6:02231:02232
1YJ9:02231:02232
3CCQ:02231:02232
2OTJ:02231:02232
2QEX:01930:01929
1VQN:01829:01828
1VQM:01829:01828
1YJN:01829:01828
3R8O:A506:A505
3CCM:01829:01828
1YI2:01829:01828
1FFK:01782:01781
1N8R:A1829:A1828
1Q82:A1829:A1828
1VQ5:01829:01828
1NJI:A1829:A1828
1VQ7:01829:01828
1VQ8:01829:01828
3CCS:02231:02232
1VQ9:01829:01828
1YHQ:01829:01828
3CME:01829:01828
3CCV:01829:01828
1K9M:A1829:A1828
1M90:A1829:A1828
1Q81:A2231:A2232
1YJ9:01829:01828
3CCL:02079:02078
3CC4:01829:01828
1HR2:B65:B64
3G6E:01829:01828
1HR2:A64:A63
3G71:01829:01828
3CCS:01829:01828
3G71:02231:02232
3I56:01829:01828
3CMA:01829:01828
1VQ6:01829:01828
2R8S:R65:R64
1K8A:A2079:A2078
3U5F:61277:61278
2QA4:01828:01827
1KD1:A2079:A2078
1VQL:01930:01929
1VQP:01930:01929
Closest classifer groups: show all      show selected
Group Members RMSD
stacking/>< 511 0.019
base-phosphate/W_5BPh 6 0.107
stacking/>> 1 0.137
base-ribose/H_9BR 12 0.156
base-ribose/H_0BR 62 0.160
stacking/<< 22 0.162
base-ribose/W_6BR 34 0.164
base-ribose/W_5BR 10 0.284
base-phosphate/W_4BPh 24 0.334
base-ribose/W_4BR 14 0.354

Extra

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Reference image (generated by PyMOL):
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All members (generated by PyMOL):
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