ClaRNA

Doublet Group info: classifier/stacking/></UC/sub-004

distance statistics     members distance graph (clans)     superimpose     cluster

Details

N. type: None
Program used: None
Category: classifier
SubCategory: stacking
Desc: ></UC/sub-004
Members:
count: 54
download members
1K8A:A258:A228
3CME:0258:0228
1VQ4:0258:0228
1Q81:A258:A228
1QVG:0258:0228
1KD1:A258:A228
1VQ8:0258:0228
1VQM:0258:0228
1YJ9:0258:0228
1VQ6:0258:0228
1VQ9:0258:0228
1YHQ:0258:0228
3CC4:0258:0228
1K9M:A258:A228
3CCQ:0258:0228
3CCS:0258:0228
1VQP:0258:0228
1YJW:0258:0228
1VQ5:0258:0228
3G71:0258:0228
1S72:0258:0228
3CCU:0258:0228
1JJ2:0258:0228
2OTL:0258:0228
1VQN:0258:0228
3CCE:0258:0228
1N8R:A258:A228
1VQ7:0258:0228
1YIJ:0258:0228
1YIT:0258:0228
3I56:0258:0228
3CC2:0258:0228
1NJI:A258:A228
3CMA:0258:0228
3CXC:0258:0228
1YI2:0258:0228
1Q86:A258:A228
1M90:A258:A228
3CCL:0258:0228
3CCV:0258:0228
3CCM:0258:0228
3CC7:0258:0228
1Q82:A258:A228
3G6E:0258:0228
1VQO:0258:0228
1YJN:0258:0228
2OTJ:0258:0228
3CD6:0258:0228
3CCR:0258:0228
1VQL:0258:0228
1VQK:0258:0228
3CPW:0258:0228
2QEX:0258:0228
1FFK:0257:0227
Closest classifer groups: show all      show selected
Group Members RMSD
base-phosphate/H_9BPh 3 0.000
stacking/>< 11 0.149
stacking/>> 99 0.171
stacking/<< 12 0.185
base-ribose/H_0BR 3 0.218
base-ribose/H_7BR 36 0.221
base-phosphate/H_0BPh 11 0.247
base-phosphate/W_6BPh 56 0.615
base-phosphate/W_5BPh 20 0.658
base-ribose/W_6BR 34 0.658

Extra

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Reference image (generated by PyMOL):
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All members (generated by PyMOL):
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