ClaRNA

Doublet Group info: classifier/stacking/></UC/sub-005

distance statistics     members distance graph (clans)     superimpose     cluster

Details

N. type: None
Program used: None
Category: classifier
SubCategory: stacking
Desc: ></UC/sub-005
Members:
count: 52
download members
2ZJR:X317:X319
3CCS:01897:01852
3CCR:01897:01852
3CCU:01897:01852
1VQ9:01897:01852
3CC4:01897:01852
3CCL:01897:01852
3OHJ:A1814:A1763
3U5H:52052:52008
3CME:01897:01852
3OHK:A1814:A1763
3CCQ:01897:01852
1YHQ:01897:01852
3CPW:01897:01852
1NJI:A1897:A1852
3G6E:01897:01852
3CC7:01897:01852
1VQN:01897:01852
2OTJ:01897:01852
1VQM:01897:01852
1K8A:A1897:A1852
1VQK:01897:01852
3CC2:01897:01852
1VQL:01897:01852
1FFK:01850:01805
1M90:A1897:A1852
3CCM:01897:01852
3U5D:12048:12004
3G71:01897:01852
1VQ5:01897:01852
1K9M:A1897:A1852
3CCE:01897:01852
3CCV:01897:01852
1VQO:01897:01852
1S72:01897:01852
2QEX:01897:01852
1VQ8:01897:01852
3CMA:01897:01852
1JJ2:01897:01852
1VQ7:01897:01852
1YJN:01897:01852
1Q81:A1897:A1852
1VQP:01897:01852
1YJW:01897:01852
1QVG:01897:01852
1N8R:A1897:A1852
1VQ6:01897:01852
3CXC:01897:01852
1KD1:A1897:A1852
1YI2:01897:01852
2OTL:01897:01852
1YIT:01897:01852
Closest classifer groups: show all      show selected
Group Members RMSD
stacking/>> 36 0.076
stacking/>< 6 0.136
base-ribose/H_0BR 2 0.183
base-ribose/H_9BR 1 0.210
stacking/<< 44 0.214
base-phosphate/H_9BPh 8 0.288
base-ribose/H_7BR 4 0.422
base-ribose/S_1BR 4 0.546
base-phosphate/W_3BPh 8 0.549
base-phosphate/H_0BPh 3 0.550

Extra

PDB:download
Reference image (generated by PyMOL):
pymol image
show in jmol
All members (generated by PyMOL):
pymol image
show in jmol