sequences=12
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>3R8T-A1987-A1988
X
>2ZJR-X1860-X1861
X
>3CCJ-01829-01828
X
>3KNI-A1910-A1911
X
>3DS7-A33-A34
X
>3CCE-01829-01828
X
>3R8S-A1988-A1989
X
>3U5F-61200-61201
X
>3OH5-A1911-A1912
X
>3OH7-A1911-A1912
X
>3OHJ-A1911-A1912
X
>3OHK-A1911-A1912
X
</seq>
<hsp>
0 1:0.642317794392
0 2:0.574877005087
0 3:0.55332524798
0 4:0.797645147726
0 5:0.60551840167
0 6:0.358552724603
0 7:0.482550287404
0 8:0.419977585693
0 9:0.46819787389
0 10:0.501098726351
0 11:0.52184294622
1 2:0.546363291773
1 3:0.597707992359
1 4:0.88301196645
1 5:0.643550379647
1 6:0.884685777602
1 7:0.611228778936
1 8:0.780491364716
1 9:0.809881817574
1 10:0.885377431723
1 11:0.899339944316
2 3:0.744718331538
2 4:0.894460037664
2 5:0.291808628884
2 6:0.777474555557
2 7:0.717662100824
2 8:0.739143016226
2 9:0.7643489964
2 10:0.859876207322
2 11:0.857271564921
3 4:1.0
3 5:0.830822011608
3 6:0.58077212311
3 7:0.538521059193
3 8:0.644285177078
3 9:0.705151469183
3 10:0.639291725205
3 11:0.713689031601
4 5:0.750466391496
4 6:0.847123648118
4 7:0.711153927456
4 8:0.667410606392
4 9:0.656059930181
4 10:0.834598427315
4 11:0.80852288372
5 6:0.737408289227
5 7:0.619469599383
5 8:0.610522811291
5 9:0.612278674754
5 10:0.748398843293
5 11:0.717665603182
6 7:0.500128029684
6 8:0.328480593323
6 9:0.382638620178
6 10:0.312544936139
6 11:0.361511926983
7 8:0.283150798547
7 9:0.308818869587
7 10:0.346515067912
7 11:0.360213556355
8 9:0.090426668992
8 10:0.203972226802
8 11:0.187113922622
9 10:0.225145465348
9 11:0.173164215431
10 11:0.105129089317
</hsp>