sequences=7
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>1N32-A377-A362
X
>2ZJR-X1783-X1732
X
>3F1E-A377-A362
X
>3U5H-5869-5873
X
>1XMQ-A377-A362
X
>3R8N-A385-A370
X
>3R8O-A385-A370
X
</seq>
<hsp>
0 1:0.765637680562
0 2:0.410081307567
0 3:0.51730573817
0 4:0.253909740843
0 5:0.461276530218
0 6:0.402574159775
1 2:0.911201651637
1 3:1.0
1 4:0.812173444175
1 5:0.722764492404
1 6:0.754318762612
2 3:0.338309752348
2 4:0.351015636292
2 5:0.404970050165
2 6:0.498958184228
3 4:0.36590853551
3 5:0.47805399329
3 6:0.545233710498
4 5:0.483241355096
4 6:0.294005864334
5 6:0.495721075031
</hsp>