ClaRNA

Doublet Group info: classifier/stacking/></UG/sub-001

distance statistics     members distance graph (clans)     superimpose     cluster

Details

N. type: None
Program used: None
Category: classifier
SubCategory: stacking
Desc: ></UG/sub-001
Members:
count: 73
download members
3R8S:A2190:A2217
1M5P:E59:E20
1Q81:A2088:A2103
3OGE:A619:A573
3B58:C10:B19
1M5V:E59:E20
2D2K:D10:C6
3U5H:51503:51488
2FGP:D10:C6
3CC7:02088:02103
2UUB:A619:A573
1YJW:02088:02103
3CME:02088:02103
1VQ6:02088:02103
3CCS:02088:02103
2UUA:A619:A573
2OTL:02088:02103
2UXC:A619:A573
3G6E:02088:02103
1VQM:02088:02103
1VQ9:02088:02103
2VQE:A619:A573
1KD1:A2088:A2103
3OHD:A619:A573
3CXC:02088:02103
1VQK:02088:02103
3CCE:02088:02103
1VQP:02088:02103
3CCL:02088:02103
1K8A:A2088:A2103
2ZJR:X2542:X2535
1XMQ:A619:A573
1VQL:02088:02103
3F1F:A2191:A2208
1M90:A2088:A2103
1Q82:A2088:A2103
2ZJR:X1988:X2011
1N8R:A2088:A2103
3CPW:02088:02103
2J03:A442:A201
2OTL:0422:0178
3CC7:0422:0178
3CMA:0422:0178
2OTJ:0422:0178
1YJW:0422:0178
2QEX:0422:0178
1VQ9:0422:0178
3CCL:0422:0178
3CPW:0422:0178
3I56:0422:0178
1VQM:0422:0178
3R8T:A426:A219
3CD6:0422:0178
1VQP:0422:0178
1VQN:0422:0178
3CCU:0422:0178
1JJ2:0422:0178
3OI1:A442:A201
3OHZ:A442:A201
1VQ8:0422:0178
1VQL:0422:0178
3CC2:0422:0178
1K8A:A422:A178
3CCM:0422:0178
3CCQ:0422:0178
1YHQ:0422:0178
3CCS:0422:0178
1NJI:A422:A178
3OHJ:A442:A201
3OHK:A442:A201
3F1H:A449:A204
2QA4:0422:0178
3R8S:A426:A219
Closest classifer groups: show all      show selected
Group Members RMSD
stacking/>< 1 0.057
stacking/>> 2 0.094
stacking/<< 5 0.095
base-ribose/W_6BR 63 0.207
base-ribose/W_4BR 1 0.231
base-phosphate/H_0BPh 2 0.246
base-phosphate/H_9BPh 5 0.289
base-phosphate/H_7BPh 11 0.307
base-ribose/W_3BR 1 0.311
base-ribose/H_9BR 5 0.354

Extra

PDB:download
Reference image (generated by PyMOL):
pymol image
show in jmol
All members (generated by PyMOL):
pymol image
show in jmol