sequences=13
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>1FJG-A1062-A1061
X
>1N32-A1062-A1061
X
>2UXC-A1062-A1061
X
>2UUA-A1062-A1061
X
>1XMQ-A543-A544
X
>2UUB-A543-A544
X
>2VQF-A1062-A1061
X
>2VQF-A543-A544
X
>3CCM-01123-01122
X
>3F1E-A543-A544
X
>3OHC-A543-A544
X
>1FJG-A543-A544
X
>2J02-A543-A544
X
</seq>
<hsp>
0 1:0.31712579201
0 2:0.156047502428
0 3:0.195998069361
0 4:0.505564886302
0 5:0.621193668763
0 6:0.301905574279
0 7:0.518395138072
0 8:0.892897568861
0 9:0.711000672347
0 10:0.61647314803
0 11:0.540747351764
0 12:0.625119143734
1 2:0.351894700324
1 3:0.275653831491
1 4:0.578924689388
1 5:0.717188883786
1 6:0.378664572021
1 7:0.608589715753
1 8:1.0
1 9:0.825478872379
1 10:0.657239955506
1 11:0.646638713952
1 12:0.692651661142
2 3:0.204712502131
2 4:0.515993884458
2 5:0.612984260055
2 6:0.208572068877
2 7:0.498797823903
2 8:0.844134357467
2 9:0.644511282054
2 10:0.600190335315
2 11:0.520888297736
2 12:0.615719555181
3 4:0.400713267997
3 5:0.519710299314
3 6:0.187306949768
3 7:0.417030383448
3 8:0.78779443866
3 9:0.603387094892
3 10:0.497310638768
3 11:0.434435376541
3 12:0.496444995206
4 5:0.201200526806
4 6:0.429909014371
4 7:0.132815722954
4 8:0.585332744036
4 9:0.413467419291
4 10:0.260570382167
4 11:0.155122185521
4 12:0.254153854465
5 6:0.505694012862
5 7:0.1449692236
5 8:0.427334379451
5 9:0.295625759624
5 10:0.325085406799
5 11:0.12947269324
5 12:0.252394480946
6 7:0.398269871222
6 8:0.696042739923
6 9:0.50380995213
6 10:0.459782855125
6 11:0.408732401282
6 12:0.473951115468
7 8:0.500600722809
7 9:0.310734830794
7 10:0.279953316159
7 11:0.088753946227
7 12:0.260796865519
8 9:0.287404178295
8 10:0.525632266786
8 11:0.444141430822
8 12:0.422503567178
9 10:0.396168062977
9 11:0.27322079049
9 12:0.344799850704
10 11:0.253936309687
10 12:0.19206913557
11 12:0.195063289168
</hsp>