sequences=11
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>3D2X-A18-A16
X
>2XD0-H11-H8
X
>2XD0-W11-W8
X
>2CKY-A18-A16
X
>3D2X-B18-B16
X
>2XD0-V11-V8
X
>3F1H-A56-A53
X
>3F1F-A56-A53
X
>3OH7-A56-A53
X
>3OH5-A56-A53
X
>3OI1-A56-A53
X
</seq>
<hsp>
0 1:0.626302658339
0 2:0.856504383552
0 3:0.313685608414
0 4:0.221603408931
0 5:0.755197612065
0 6:0.796138749716
0 7:0.793054057835
0 8:0.999497705483
0 9:1.0
0 10:0.893989324964
1 2:0.300579054527
1 3:0.364895183799
1 4:0.475683544193
1 5:0.258809950785
1 6:0.552099891711
1 7:0.546110986238
1 8:0.790056251756
1 9:0.790426055387
1 10:0.654339259263
2 3:0.604447334168
2 4:0.685328155813
2 5:0.235932956361
2 6:0.548904476934
2 7:0.542212037241
2 8:0.728720440414
2 9:0.725146994315
2 10:0.57931522506
3 4:0.230245005543
3 5:0.513080520288
3 6:0.693748350369
3 7:0.690576152125
3 8:0.940596082511
3 9:0.941412569191
3 10:0.810932974632
4 5:0.579771366173
4 6:0.695488306605
4 7:0.691585409736
4 8:0.912154019921
4 9:0.911353075852
4 10:0.77535290719
5 6:0.615389799536
5 7:0.608400696619
5 8:0.80702608365
5 9:0.808908988896
5 10:0.686753632759
6 7:0.02018308488
6 8:0.301618754604
6 9:0.31212580758
6 10:0.275319929651
7 8:0.296711785141
7 9:0.306683535554
7 10:0.269171695397
8 9:0.0416528396039
8 10:0.285956787165
9 10:0.267600832123
</hsp>