sequences=7
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>3U5D-12141-11843
X
>2UXC-A473-A428
X
>3OH5-A1907-A1608
X
>1XMQ-A473-A428
X
>3CXC-01978-01703
X
>3KNH-A621-A721
X
>3R8T-A1983-A1660
X
</seq>
<hsp>
0 1:0.579325277552
0 2:0.462306997974
0 3:0.547681035958
0 4:0.450699257109
0 5:0.533984001338
0 6:0.448016022767
1 2:0.398581137327
1 3:0.123690511927
1 4:0.393234216901
1 5:0.999996373654
1 6:0.608464889335
2 3:0.454304031993
2 4:0.492397098149
2 5:0.798417130985
2 6:0.424628295797
3 4:0.349894831857
3 5:0.982625390041
3 6:0.609730492711
4 5:0.86154353412
4 6:0.511369079508
5 6:0.666971798559
</hsp>