sequences=6
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>3U5B-21743-21742
X
>2HOM-A20-A21
X
>2J01-A2461-A2460
X
>3OHZ-A2414-A2413
X
>3OI1-A623-A622
X
>3OH7-A2414-A2413
X
</seq>
<hsp>
0 1:0.955912623854
0 2:0.799436539699
0 3:0.805434724697
0 4:0.976853944748
0 5:0.999995271104
1 2:0.809253287589
1 3:0.773184207589
1 4:0.66831363777
1 5:0.811725943426
2 3:0.479741255062
2 4:0.519901152147
2 5:0.502139593346
3 4:0.511738376414
3 5:0.315682502611
4 5:0.309582617599
</hsp>