sequences=7
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>3U5D-12546-12515
X
>3U5H-52547-52516
X
>1HR2-B86-B66
X
>2R8S-R86-R66
X
>1L8V-A85-A65
X
>1L8V-B85-B65
X
>1HR2-A85-A65
X
</seq>
<hsp>
0 1:0.166747443355
0 2:1.0
0 3:0.660197124644
0 4:0.922400859978
0 5:0.913406292632
0 6:0.919577744909
1 2:0.972360234592
1 3:0.632362611165
1 4:0.913941946075
1 5:0.906098719841
1 6:0.886763566754
2 3:0.48991057014
2 4:0.492065337685
2 5:0.487725851134
2 6:0.294579650911
3 4:0.42273898665
3 5:0.405001851116
3 6:0.428488496186
4 5:0.0379703698292
4 6:0.331257215257
5 6:0.334414785291
</hsp>