sequences=11
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>3KNI-A2709-A2795
X
>1QU3-T46-T22
X
>3L0U-A45-A21
X
>2AZX-D44-D20
X
>3AMT-B47-B23
X
>3U5H-52181-52186
X
>1GAX-D44-D20
X
>2CSX-D46-D22
X
>1IVS-D44-D20
X
>1IVS-C44-C20
X
>1GAX-C44-C20
X
</seq>
<hsp>
0 1:0.914503905119
0 2:0.757669547473
0 3:0.654847360231
0 4:0.846631806421
0 5:0.815137602385
0 6:0.924792542491
0 7:0.731813173788
0 8:0.915532727856
0 9:1.0
0 10:0.988640088343
1 2:0.784491627823
1 3:0.637537442649
1 4:0.375185228826
1 5:0.614770971766
1 6:0.607869705779
1 7:0.682528367886
1 8:0.631234353441
1 9:0.479375801586
1 10:0.449652187955
2 3:0.340868495229
2 4:0.484802123402
2 5:0.484782476418
2 6:0.373100911779
2 7:0.323669585243
2 8:0.311238431533
2 9:0.496454755112
2 10:0.509330357765
3 4:0.383336529165
3 5:0.402176455717
3 6:0.468397792816
3 7:0.161345181103
3 8:0.390529165658
3 9:0.47178601782
3 10:0.454354148285
4 5:0.509550425801
4 6:0.428341108387
4 7:0.411727344838
4 8:0.383060836463
4 9:0.28029208764
4 10:0.269707896632
5 6:0.318148106317
5 7:0.464318743976
5 8:0.324770372887
5 9:0.412227005857
5 10:0.388037398884
6 7:0.469302684774
6 8:0.13280128781
6 9:0.272424687741
6 10:0.277070191301
7 8:0.395023485616
7 9:0.4920226561
7 10:0.46709565402
8 9:0.239175371379
8 10:0.249378434462
9 10:0.0813729345071
</hsp>