ClaRNA

Doublet Group info: classifier/bp/WH_tran/GA/sub-001

distance statistics     members distance graph (clans)     superimpose     cluster

Details

N. type: None
Program used: None
Category: classifier
SubCategory: bp
Desc: WH_tran/GA/sub-001
Members:
count: 171
download members
2GCV:B79:B106
2HO6:B79:B106
3F1H:A76:A95
3F1F:A76:A95
1M90:A1752:A1755
1QVG:0565:0568
3B4C:B78:B105
1FFK:0564:0567
3OHJ:A1313:A1316
1YI2:01752:01755
3OHK:A1313:A1316
1VQ7:01752:01755
2H0S:B79:B106
2H0W:B79:B106
1Q81:A1752:A1755
2QEX:02471:02474
2H0X:B79:B106
3CXC:0565:0568
3B4B:B79:B106
3U5D:12716:12719
2UXC:A1054:A1057
3SD1:A58:A61
1YI2:0565:0568
1VQ4:01752:01755
3NPQ:B20:B23
2OTL:01752:01755
3NPQ:A20:A23
1YIJ:0565:0568
3CCS:0565:0568
1VQK:02471:02474
3U5B:21279:21282
1VQ5:01752:01755
1VQ6:0565:0568
3CXC:02471:02474
3SD3:A58:A61
3G9C:S108:S111
2QA4:0565:0568
3CMA:0457:0460
3CC2:0565:0568
1VQ9:0565:0568
3OHK:A1790:A1793
1K8A:A2471:A2474
1VQN:02471:02474
2VQE:A1054:A1057
3F1H:A2839:A2842
3L3C:Q108:Q111
2J01:A76:A95
1QVG:01752:01755
3CCE:0457:0460
3CC4:0565:0568
1N32:A1054:A1057
3CPW:0565:0568
1VQ8:0565:0568
2OTJ:02471:02474
2QEX:0457:0460
3CC7:02471:02474
1FJG:A1054:A1057
3F1F:A2839:A2842
3CCS:0457:0460
1M90:A565:A568
3CCU:0565:0568
3F1G:A1054:A1057
2J03:A76:A95
3OI1:A1790:A1793
1QVG:02471:02474
1YHQ:0565:0568
1Q86:A2471:A2474
3G71:0565:0568
1K8A:A457:A460
3CCR:01286:01289
2UUB:A1054:A1057
2OTJ:0457:0460
3OH7:A1790:A1793
2QEX:0565:0568
2NZ4:S108:S111
1VQ7:0565:0568
3CCL:0457:0460
1VQK:0565:0568
1KD1:A457:A460
3U5H:52498:52501
1VQP:0565:0568
3U5D:12497:12500
3CCQ:0565:0568
1Q82:A457:A460
1Q86:A457:A460
3G6E:0565:0568
3CCL:02471:02474
3OHZ:A477:A480
3NPN:A20:A23
2H0Z:B91:B94
1VQM:0565:0568
3OH5:A1790:A1793
3CCV:0565:0568
1Q96:C12:C15
1N8R:A457:A460
3OHJ:A477:A480
1Q82:A2471:A2474
1KD1:A2471:A2474
3OH7:A477:A480
3U5F:61291:61294
3CCU:0457:0460
3CCE:0565:0568
1VQ5:0565:0568
1YJ9:01752:01755
1VQL:0565:0568
3G71:0457:0460
1Q81:A2471:A2474
3CC4:0457:0460
1NJI:A457:A460
1YJ9:0457:0460
3OH5:A477:A480
1FG0:A462:A465
3OI1:A477:A480
1M90:A2471:A2474
1YJW:0457:0460
1YJN:0457:0460
1YI2:02471:02474
1FFK:02424:02427
2H0Z:B79:B106
3CCJ:01286:01289
3R8T:A1216:A1219
1YIT:01286:01289
3CD6:01286:01289
3CC4:01286:01289
3R8S:A1216:A1219
1VQP:01286:01289
3CME:01286:01289
1VQ9:01286:01289
1VQK:01286:01289
1VQN:01286:01289
1NJI:A1286:A1289
3CMA:01286:01289
3B4A:B90:B93
1Q81:A457:A460
3CPW:01286:01289
1YHQ:01286:01289
1S72:01286:01289
1VQL:01286:01289
3U5H:51354:51357
2QEX:01286:01289
1VQO:01286:01289
3CCL:01286:01289
1JJ2:01286:01289
1YI2:01286:01289
1VQ7:01286:01289
3CCU:01286:01289
3CCV:01286:01289
1YJW:01286:01289
1VQ6:01286:01289
1K9M:A1286:A1289
1VQM:01286:01289
1YIJ:01286:01289
3CCE:01286:01289
3G6E:01286:01289
2OTJ:01286:01289
3G71:01286:01289
2OTL:01286:01289
3CC7:01286:01289
3R8N:A1075:A1078
3R8S:A462:A465
1YJN:01286:01289
1Q86:A1286:A1289
3U5D:11348:11351
1Q81:A1286:A1289
1VQ4:01286:01289
1YJ9:01286:01289
1N8R:A1286:A1289
3CCJ:02471:02474
1KD1:A1286:A1289
3CXC:01286:01289
1QVG:01286:01289
Closest classifer groups: show all      show selected
Group Members RMSD
bp/SH_cis 2 0.078
bp/HS_tran 3 0.141
bp/HW_tran 4 0.206
base-phosphate/W_4BPh 88 0.216
base-phosphate/W_3BPh 29 0.256
bp/SH_tran 4 0.270
base-phosphate/W_6BPh 4 0.290
bp/WH_tran 136 0.344
base-ribose/SW_2BR 19 0.353
bp/SS_cis 24 0.417

Extra

PDB:download
Reference image (generated by PyMOL):
pymol image
show in jmol
All members (generated by PyMOL):
pymol image
show in jmol