sequences=11
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>3R8S-A2231-A2070
X
>1K9M-A2117-A2064
X
>3F1H-A2222-A2071
X
>1KD1-A2117-A2064
X
>1Q82-A2117-A2064
X
>3OHK-A2068-A1993
X
>1YJN-02117-02064
X
>1N8R-A2117-A2064
X
>3OI1-A2068-A1993
X
>3OHZ-A2068-A1993
X
>3OH5-A2068-A1993
X
</seq>
<hsp>
0 1:0.848755749916
0 2:0.750777323998
0 3:0.943225437267
0 4:0.920196737129
0 5:0.978928458998
0 6:0.893062622108
0 7:0.774093326858
0 8:0.946827198233
0 9:0.957180534702
0 10:0.929700041333
1 2:0.591038860256
1 3:0.233482610804
1 4:0.283013659625
1 5:0.996958924468
1 6:0.450978156892
1 7:0.408696845761
1 8:0.87966920933
1 9:0.84887190801
1 10:0.593233363757
2 3:0.703422560002
2 4:0.640856176627
2 5:0.962155856656
2 6:0.601688721137
2 7:0.591660785136
2 8:0.851736582703
2 9:0.847030061999
2 10:0.827694930265
3 4:0.217670166103
3 5:1.0
3 6:0.453678230281
3 7:0.399921000913
3 8:0.875177479876
3 9:0.836449730812
3 10:0.618203596599
4 5:0.875551056011
4 6:0.347494012613
4 7:0.273597028141
4 8:0.739315325952
4 9:0.699618773652
4 10:0.51407081732
5 6:0.698529442726
5 7:0.631095429267
5 8:0.300832593856
5 9:0.3049253429
5 10:0.549968451843
6 7:0.235567163985
6 8:0.561814846698
6 9:0.53582639562
6 10:0.377759833417
7 8:0.510290404263
7 9:0.47953191185
7 10:0.360624229571
8 9:0.0888244022037
8 10:0.496907321933
9 10:0.459195603354
</hsp>