sequences=18
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>3G78-A381-A141
X
>3R8S-A2481-A1120
X
>3R8T-A2480-A1120
X
>1VBY-B40-B42
X
>2OJ3-B40-B42
X
>1DRZ-B39-B41
X
>1VBZ-B40-B42
X
>3F1G-A361-A363
X
>3F1E-A361-A363
X
>1SJ3-R40-R42
X
>2OIH-B40-B42
X
>1VC0-B40-B42
X
>2UUB-A361-A363
X
>1SJF-B41-B43
X
>1VBX-B40-B42
X
>1SJ4-R40-R42
X
>1VC6-B39-B41
X
>1CX0-B39-B41
X
</seq>
<hsp>
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0 2:0.66516382868
0 3:0.81156486666
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0 5:0.774304310006
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</hsp>