sequences=17
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>3OH7-A2261-A2264
X
>3OH5-A2261-A2264
X
>3OHZ-A2261-A2264
X
>1Y39-D32-D35
X
>2CSX-C55-C58
X
>1FFK-0612-0615
X
>3OVB-D13-D16
X
>2ZH3-B13-B16
X
>1KD1-A613-A616
X
>1N8R-A613-A616
X
>1K8A-A613-A616
X
>1NJI-A613-A616
X
>1Q81-A613-A616
X
>1Q82-A613-A616
X
>2ZM5-C54-C57
X
>1JJ2-0613-0616
X
>1M90-A613-A616
X
</seq>
<hsp>
0 1:0.00716585337115
0 2:0.0375511113199
0 3:0.660636837768
0 4:0.100400860852
0 5:0.245452713995
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14 15:0.194435544995
14 16:0.198333448521
15 16:0.0142619351455
</hsp>