sequences=11
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>3CME-0988-01233
X
>1VQO-0988-01233
X
>1VQP-0988-01233
X
>2QEX-0988-01233
X
>1YJ9-0988-01233
X
>1VQN-0988-01233
X
>3CCM-0988-01233
X
>1VQ5-0988-01233
X
>1VQ8-0988-01233
X
>3CCL-0988-01233
X
>3CCR-0988-01233
X
</seq>
<hsp>
0 1:0.422912357378
0 2:0.668642689978
0 3:0.793509840161
0 4:0.830920728028
0 5:0.562997480451
0 6:0.60056748667
0 7:0.94351559955
0 8:0.523735357228
0 9:0.990796854809
0 10:0.803698792627
1 2:0.588810290119
1 3:0.576888529975
1 4:0.540666502583
1 5:0.615577390696
1 6:0.601911243927
1 7:0.616276819026
1 8:0.469610336273
1 9:0.611653016827
1 10:0.490059947084
2 3:0.492913890207
2 4:0.512732363877
2 5:0.299989238863
2 6:0.242406124389
2 7:0.549405898213
2 8:0.236563975022
2 9:0.863707067133
2 10:0.542553879161
3 4:0.285342685191
3 5:0.648661972828
3 6:0.54829512461
3 7:0.337782135521
3 8:0.435391501668
3 9:0.584719886098
3 10:0.543258174848
4 5:0.666345333279
4 6:0.565529056307
4 7:0.275245009666
4 8:0.467828371977
4 9:0.550719668018
4 10:0.31717294411
5 6:0.182270777288
5 7:0.739215653084
5 8:0.232577127495
5 9:1.0
5 10:0.673978893007
6 7:0.659743883631
6 8:0.199577620035
6 9:0.919756627892
6 10:0.60931630054
7 8:0.56064609838
7 9:0.469652009137
7 10:0.40829498555
8 9:0.8219966007
8 10:0.525809322987
9 10:0.628722481544
</hsp>