sequences=8
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>3OH7-A1204-A1976
X
>3KNH-Y45-Y49
X
>3OHZ-A1204-A1976
X
>3OI1-A1204-A1976
X
>3R8S-A1248-A2053
X
>3OHK-A1204-A1976
X
>3KNI-A1210-A1975
X
>3KNK-A1209-A1975
X
</seq>
<hsp>
0 1:0.987759258381
0 2:0.0163983495087
0 3:0.0234153635025
0 4:0.0773562094575
0 5:0.0387092989863
0 6:0.0727697180312
0 7:0.133456552586
1 2:0.980480733312
1 3:0.973875796241
1 4:0.967722297434
1 5:1.0
1 6:0.988599544579
1 7:0.933667235232
2 3:0.0207579523656
2 4:0.0695200664048
2 5:0.039506878472
2 6:0.0696120873144
2 7:0.129561522486
3 4:0.0664603538779
3 5:0.044247393418
3 6:0.0708281305993
3 7:0.12148031554
4 5:0.0628531198774
4 6:0.0698612281775
4 7:0.0823220064584
5 6:0.0720232684599
5 7:0.122965321509
6 7:0.0975394808486
</hsp>