sequences=7
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>3R8O-V32-V35
X
>2DR2-B53-B56
X
>3AKZ-H52-H55
X
>2ZJR-X498-X501
X
>2AZX-C31-C34
X
>3SKL-A18-A48
X
>3KNI-A2468-A2471
X
</seq>
<hsp>
0 1:0.586060433832
0 2:0.22718746706
0 3:0.402893017031
0 4:0.269772911064
0 5:0.795766583221
0 6:0.824144522577
1 2:0.417359196466
1 3:0.80031917957
1 4:0.704517238298
1 5:0.500444141667
1 6:0.675919509123
2 3:0.497949914972
2 4:0.360772014025
2 5:0.723306901552
2 6:0.804930122671
3 4:0.394138490711
3 5:0.999846524586
3 6:1.0
4 5:0.888191489734
4 6:0.919517109036
5 6:0.45532230371
</hsp>