sequences=7
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>2CT8-C55-C58
X
>3OH7-A577-A580
X
>2J01-A577-A580
X
>2J03-A577-A580
X
>3OHK-A577-A580
X
>2UXC-A767-A770
X
>2J02-Y7-Y10
X
</seq>
<hsp>
0 1:0.977722352202
0 2:0.835384296019
0 3:0.830116050278
0 4:0.982090078153
0 5:1.0
0 6:0.624392983698
1 2:0.228212071099
1 3:0.224374687641
1 4:0.0871064108106
1 5:0.900843569699
1 6:0.872016601235
2 3:0.0166099968597
2 4:0.195828330072
2 5:0.888070448232
2 6:0.781089535607
3 4:0.197005793637
3 5:0.880811203568
3 6:0.773869687622
4 5:0.938368326754
4 6:0.892141248072
5 6:0.516617961413
</hsp>